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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs67101482 chr7:72264474 C/T TYW1B chr7:72023729-72298777:- 1.2 7.66 4.47E-10 Box Plot
ACC rs67115810 chr17:62984435 T/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs67140729 chr8:71619094 AATT/A XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs67161969 chr6:86900269 G/A SNHG5 chr6:86370668-86388454:- 0.82 5.48 1.25E-6 Box Plot
ACC rs6717723 chr2:99756930 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs67186982 chr8:71596808 GGTCT/G XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs67188607 chr7:72233858 T/C TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs67244397 chr6:86896349 G/A SNHG5 chr6:86370668-86388454:- 0.82 5.57 9.05E-7 Box Plot
ACC rs6727043 chr2:88461512 A/T THNSL2 chr2:88469814-88486155:+ 0.83 6.58 2.33E-8 Box Plot
ACC rs6727749 chr2:99793590 C/T TSGA10 chr2:99613724-99771427:- 0.57 5.58 8.74E-7 Box Plot
ACC rs67330703 chr14:65395064 C/T CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs6733285 chr2:99725575 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs67385289 chr1:235321381 TA/T RBM34 chr1:235294498-235324772:- 0.65 5.92 2.57E-7 Box Plot
ACC rs673957 chr7:64699105 G/A INTS4L1 chr7:64601603-64694600:+ 0.74 5.24 2.99E-6 Box Plot
ACC rs67405755 chr1:63975859 C/CA ITGB3BP chr1:63906441-64059392:- 0.62 6.66 1.71E-8 Box Plot